Dear colleagues,
I would like to create a local database of protein sequences for peptide
finger printing of an organism of which most of its sequence information is
only available on DNA level. Since I assume that there must be a script or
program which reads the DNA, translates it in all six ORF's and writes it
into a FASTA compatible file already out there, I'd like to ask if you are
aware of such a program. It should make the translation automatically
without supervision because I've got around 200 MByte sequence data...
Any hints will be greatly appreciated.
Yours sincerely,
Marcus
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Dr. Marcus Macht
University of Cologne
Centre for molecular medicine - Service laboratory
Joseph-Stelzmann-Str. 52
50931 Cologne, Germany
Tel.: +49 221 478-6995
Fax: +49 221 478-6977
e-mail: Marcus.Macht@uni-koeln.de
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