A real good site for Nucleic Acid Mass spec is
http://medlib.med.utah.edu/masspec/
It is the "masspec toolbox" at the U of Utah. Look at the software link.
It gives a selection of java tools.The Mongo Oligo tool is maybe the
closest to what you want.I think you might not be in luck for the
phosphothiorated DNA there however. It does allow one to have ONE user
modified residue. But that is not going to cover it. Maybe you could
request it from them.
Then there is
http://web.mit.edu/toxms/www/dnld6.htm
but I have not tried it. It is an excel 5.0 xls file so maybe you could
hack it to do the job.
Matt Sweeney
mattsweeney@earthlink.net
Mass Spec Consulting
Training/Operations/Consulting/Method Development
LC/MS Pharmacokinetics, Peptides, Proteins, Metabolism,
Maintenance Classes, Specialist in Finnigan Equipment and Software
-----Original Message-----
From: Radhika Krishnan <rkrishna@coh.org>
To: Recipients of ABRF List <abrf@aecom.yu.edu>
Date: Tuesday, May 23, 2000 8:13 PM
Subject: Mass spec & Pepsyn
>Hi Mass Spec mavens,
>Is there a good site on the internet for analysing phosothiorated DNA
>oligomers?
>
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