Re: silver stain

From: Ken Mitchelhill (ken_mitchelhill@hotmail.com)
Date: Tue May 29 2001 - 19:31:28 EDT


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<DIV><FONT size=2>Hi Jeff,</FONT></DIV>
<DIV><FONT size=2></FONT>&nbsp;</DIV>
<DIV><FONT size=2>it seems&nbsp;you are not the only one with problems accessing
Gary's protocol, I have taken the liberty of sending a copy to the ABRF list as
I expect there will be a few others out there interested in seeing this very
easy protocol. I have sent it in HTML format and apologise in advance to those
with plain text email clients.</FONT></DIV>
<DIV><FONT size=2></FONT>&nbsp;</DIV>
<DIV><FONT size=2>Regards....Ken</FONT></DIV>
<DIV><FONT size=2></FONT>&nbsp;</DIV>
<DIV><FONT size=2></FONT>
<BLOCKQUOTE>
  <BLOCKQUOTE>
    <P><A name=top></A><FONT face=Arial color=#002b55 size=4><B>Silver staining
    of proteins in polyacrylamide gels</B></FONT></P></BLOCKQUOTE></BLOCKQUOTE>
<BLOCKQUOTE>
  <BLOCKQUOTE>
    <P align=left><FONT face=Arial color=#002b55 size=1><I>(adapted from Blum et
    al. Electrophoresis, </I><I><U>8</U></I><I>, 93-99, 1987)</I></FONT><FONT
    color=#002b55 size=1> </FONT></P></BLOCKQUOTE></BLOCKQUOTE>
<HR width="90%" color=#a3a5d3>

<BLOCKQUOTE>
  <BLOCKQUOTE>
    <P><FONT face=Arial color=#ff8040 size=3><B>Everything
    </B><B><BLINK>Fresh!</BLINK></B></FONT><FONT color=#ff8040 size=2>
    </FONT></P>
    <P><FONT face=Arial color=#002b55 size=2>This is an easy staining protocol
    and is compatible with mass spectrometric protein analysis. The stain is
    useful for protein concentrations ranging from &lt;1ug to &gt;1ng. If the
    staining does not work, for whatever reason, then gels can easily be
    </FONT><A
    href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining.html#Destaining protocol"><FONT
    face=Arial color=#002b55 size=2><B>destained</B></FONT></A><FONT face=Arial
    color=#002b55 size=2> and restained again (see below).</FONT><FONT
    color=#002b55 size=2> </FONT></P></BLOCKQUOTE></BLOCKQUOTE>
<P align=right><A
href="http://gimr.garvan.unsw.edu.au/public/corthals/guidelines/guidelines_ext.html"><FONT
face=Arial color=#002b55 size=3><STRONG><IMG height=25
src="http://www.garvan.unsw.edu.au/public/corthals/guidelines/dotL.gif" width=14
align=textTop border=0></STRONG></FONT></A><FONT face=Arial color=#002b55
size=3><STRONG> </STRONG></FONT><A
href="http://gimr.garvan.unsw.edu.au/public/corthals/guidelines/guidelines_ext.html"><FONT
face=Arial color=#002b55 size=3><STRONG>guidelines</STRONG></FONT></A><FONT
face=Arial color=#002b55 size=3><STRONG> <IMG height=25
src="http://www.garvan.unsw.edu.au/public/corthals/guidelines/dotL.gif" width=14
align=textTop> </STRONG></FONT><A
href="http://www.garvan.unsw.edu.au/public/corthals/"><FONT face=Arial
color=#002b55 size=3><STRONG>home</STRONG></FONT></A></P>
<HR width="90%" color=#a3a5d3>

<BLOCKQUOTE>
  <BLOCKQUOTE>
    <H2><FONT face=Arial color=#002b55 size=3><EM><B>Gel staining
    protocol</B></EM></FONT></H2></BLOCKQUOTE></BLOCKQUOTE>
<DIV align=center>
<CENTER>
<TABLE cellSpacing=0 cellPadding=3 border=1>
  <TBODY>
  <TR>
    <TD width=20 height=16>&nbsp;</TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2><B>solution</B></FONT></TD>
    <TD width=300 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2><B>V =100 ml</B></FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2><B>operation</B></FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2><B>time</B></FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>1</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>sol
      A</FONT></TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>50% methanol 10% acetic acid</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>fix</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>30
      min</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>2</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>sol
      B</FONT></TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>5%
      methanol</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>incubate</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>15
      min</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>3</FONT></TD>
    <TD width=80 height=16>&nbsp;</TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>milli-Q H<SUB>2</SUB>O</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>wash 3 times</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>3
      x 5 min</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>4</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>sol. C</FONT></TD>
    <TD width=300 height=16><A name="solution c"></A><FONT
      face=Arial,Helvetica color=#002b55 size=2>sodiumthiosulphate</FONT><FONT
      color=#002b55 size=2> <BR></FONT><FONT face=Arial,Helvetica color=#002b55
      size=2>(Na<SUB>2</SUB>S<SUB>2</SUB>O3.5H<SUB>2</SUB>O)</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>0.2 g/L fresh!</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>Incubate</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>120 sec</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>5</FONT></TD>
    <TD width=80 height=16>&nbsp;</TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>milli-Q H<SUB>2</SUB>O</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>wash 3 times</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>3
      x 30 sec</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>6</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>sol
      D</FONT></TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>silver nitrate (AgNO<SUB>3</SUB>)</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>0.2 g/100 ml</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>Incubate</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>25
      min</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>7</FONT></TD>
    <TD width=80 height=16>&nbsp;</TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>milli-Q H<SUB>2</SUB>O</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>wash 3 times</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>3
      x 60 sec</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>8</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>sol
      E</FONT></TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>sodium carbonate (Na<SUB>2</SUB>CO<SUB>3</SUB>)</FONT><FONT
      color=#002b55 size=2> <BR></FONT><FONT face=Arial,Helvetica color=#002b55
      size=2>37% HCOH</FONT><FONT color=#002b55 size=2> <BR></FONT><FONT
      face=Arial,Helvetica color=#002b55
      size=2>Na<SUB>2</SUB>S<SUB>2</SUB>O3.5H<SUB>2</SUB>O (sol.C)</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>3
      g/100 ml</FONT><FONT color=#002b55 size=2> <BR></FONT><FONT
      face=Arial,Helvetica color=#002b55 size=2>50 ul/100 ml</FONT><FONT
      color=#002b55 size=2> <BR></FONT><FONT face=Arial,Helvetica color=#002b55
      size=2>2 ml/100 ml</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>develop</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>10
      min max</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>9</FONT></TD>
    <TD width=80 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>sol
      F</FONT></TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>Na<SUB>2</SUB>-EDTA&nbsp;</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>(14g / L)</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>stop develop</FONT></TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55 size=2>10
      min</FONT></TD></TR>
  <TR>
    <TD width=20 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>10</FONT></TD>
    <TD width=80 height=16>&nbsp;</TD>
    <TD width=300 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>milli-Q H<SUB>2</SUB>O</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD>
    <TD width=125 height=16><FONT face=Arial,Helvetica color=#002b55
      size=2>wash</FONT></TD>
    <TD width=125 height=16>&nbsp;</TD></TR></TBODY></TABLE></CENTER></DIV>
<P>&nbsp;</P>
<P align=right><A
href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining.html#top"><FONT
color=#002b55 size=2><IMG height=12
src="http://www.garvan.unsw.edu.au/public/corthals/guidelines/top.gif" width=12
border=0></FONT></A></P>
<HR width="90%" color=#a3a5d3>

<BLOCKQUOTE>
  <BLOCKQUOTE>
    <P><A name="Destaining protocol"></A><FONT face=Arial color=#002b55
    size=3><EM><B>Destaining protocol</B></EM></FONT></P>
    <UL>
      <LI><FONT face=Arial color=#002b55 size=2>Dissolve 0.4g potassium
      ferricyanide (K<SUB>3</SUB>Fe(CN)<SUB>6</SUB>)<SUB> </SUB>in 200ml
      </FONT><FONT face=Arial,Helvetica color=#002b55
      size=2>sodiumthiosulphate</FONT><FONT face=Arial color=#002b55 size=2>
      (</FONT><FONT face=Arial,Helvetica color=#002b55 size=2>0.2 g/L, </FONT><A
      href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining.html#solution c"><FONT
      face=Arial color=#002b55 size=2><B>solution c</B></FONT></A><FONT
      face=Arial color=#002b55 size=2> above).</FONT> </LI></UL>
    <BLOCKQUOTE>
      <P><FONT face=Arial color=#002b55 size=2><B>Destain:</B></FONT><FONT
      color=#002b55 size=2><BR></FONT></P>
      <UL>
        <LI><FONT face=Arial color=#002b55 size=2>destain until no bands are
        visible; the gel will have a yellow hue!</FONT>
        <LI><FONT face=Arial color=#002b55 size=2>wash gel 4-5 times for 15 min
        with </FONT><FONT face=Arial,Helvetica color=#002b55 size=2>milli-Q
        H<SUB>2</SUB>O</FONT><FONT face=Arial color=#002b55 size=2> until gel is
        transparent and has no background colour.</FONT>
        <LI><FONT face=Arial color=#002b55 size=2>stain gel again starting with
        </FONT><A
        href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining.html#solution c"><FONT
        face=Arial color=#002b55 size=2><B>solution c</B></FONT></A><FONT
        face=Arial color=#002b55 size=2> from gel staining protocol.</FONT>
      </LI></UL></BLOCKQUOTE></BLOCKQUOTE></BLOCKQUOTE>
<P align=right><A
href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining.html#top"><FONT
color=#002b55 size=2><IMG height=12
src="http://www.garvan.unsw.edu.au/public/corthals/guidelines/top.gif" width=12
border=0></FONT></A></P>
<HR width="90%" color=#a3a5d3>
</DIV>
<DIV><FONT color=#002b55 size=2></FONT>&nbsp;</DIV>
<DIV>
<P align=right><FONT face=Arial color=#002b55 size=1>01011999 updated<BR>Garry
Corthals (</FONT><A href="mailto:g.corthals@garvan.unsw.edu.au"><FONT face=Arial
color=#002b55 size=1>g.corthals@garvan.unsw.edu.au</FONT></A><FONT face=Arial
color=#002b55 size=1>)<BR></FONT></P>
<P align=right><FONT face=Arial color=#002b55 size=1>&nbsp;</P></FONT></DIV>
<DIV><FONT size=2>----- Original Message ----- </FONT>
<DIV><FONT size=2>From: "Jeffrey A Kowalak, Ph.D." &lt;</FONT><A
href="mailto:jkowalak@intra.nimh.nih.gov"><FONT
size=2>jkowalak@intra.nimh.nih.gov</FONT></A><FONT size=2>&gt;</FONT></DIV>
<DIV><FONT size=2>To: "Ken Mitchelhill" &lt;</FONT><A
href="mailto:ken_mitchelhill@hotmail.com"><FONT
size=2>ken_mitchelhill@hotmail.com</FONT></A><FONT size=2>&gt;</FONT></DIV>
<DIV><FONT size=2>Sent: Tuesday, May 29, 2001 8:08 PM</FONT></DIV>
<DIV><FONT size=2>Subject: RE: silver stain</FONT></DIV></DIV>
<DIV><FONT size=2><BR></FONT></DIV><FONT size=2>&gt; Hello Ken,<BR>&gt; <BR>&gt;
Apparently the link you posted is accessible only to internal UNSW
users.<BR>&gt; Any chance of copying and pasting the protocol?<BR>&gt;
Regards,<BR>&gt; Jeff<BR>&gt; <BR>&gt; Jeffrey A Kowalak, Ph.D.<BR>&gt; Mass
Spectrometry Facility Director<BR>&gt; Laboratory of Neurotoxicology<BR>&gt;
National Institute of Mental Health<BR>&gt; Building 10 Room 3D42<BR>&gt;
Bethesda, MD 20892-1262<BR>&gt; <BR>&gt; Telephone: 301-496-4242<BR>&gt;
Facsimile: 301-480-0198<BR>&gt; e-mail: </FONT><A
href="mailto:jkowalak@intra.nimh.nih.gov"><FONT
size=2>jkowalak@intra.nimh.nih.gov</FONT></A><BR><FONT size=2>&gt; <BR>&gt;
-----Original Message-----<BR>&gt; From: Association of Biomolecular Resource
Facilities<BR>&gt; [mailto:abrf-request@aecom.yu.edu]On Behalf Of Ken
Mitchelhill<BR>&gt; Sent: Thursday, May 24, 2001 7:15 PM<BR>&gt; To: Recipients
of ABRF List<BR>&gt; Subject: Re: silver stain<BR>&gt; <BR>&gt; <BR>&gt;
Paul,<BR>&gt; <BR>&gt; Gary Corthals has got a nice protocol at:<BR>&gt;
<BR>&gt; </FONT><A
href="http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining"><FONT
size=2>http://www.garvan.unsw.edu.au/public/corthals/HTML-protocols/silver_staining></A><BR><FONT
size=2>&gt; .html<BR>&gt; <BR>&gt; Ken<BR>&gt; ----- Original Message
-----<BR>&gt; From: "pds" &lt;</FONT><A
href="mailto:
pds@fossil.biochem.ualberta.ca"><FONT
size=2>pds@fossil.biochem.ualberta.ca</FONT></A><FONT size=2>&gt;<BR>&gt; To:
"Recipients of ABRF List" &lt;</FONT><A href="mailto:abrf@aecom.yu.edu"><FONT
size=2>abrf@aecom.yu.edu</FONT></A><FONT size=2>&gt;<BR>&gt; Sent: Friday, May
25, 2001 4:51 AM<BR>&gt; Subject: silver stain<BR>&gt; <BR>&gt; <BR>&gt; &gt;
Hi,<BR>&gt; &gt;<BR>&gt; &gt;&nbsp;&nbsp; What is the best prodedure for silver
staining gels for later in gel<BR>&gt; digests<BR>&gt; &gt; and mass
analysis.Thanks.<BR>&gt; &gt;<BR>&gt; &gt; Paul Semchuk<BR>&gt; &gt;<BR>&gt;
&gt;<BR>&gt; <BR>&gt; </FONT></BODY></HTML>

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