Try "Blitz" (now a Smith-Waterman search) at
http://www.ebi.ac.uk/searches/searches.html.
During the day (until our colleagues in Europe go home for the day), you
often have to settle for an e-mail response.
Steve
====================
Stephen Tindall
Argo BioAnalytica, Inc.
Phone: 1-973-605-2100
Fax: 1-973-605-2104
StvTindall@aol.com
====================
Subj: Protein analysis
Date: 98-08-31 11:38:09 EDT
From: TSTOMING@MAIL.MCG.EDU (Terry Stoming)
Sender: abrf-request@aecom.yu.edu (Association of Biomolecular Resource
Facilities)
To: abrf@aecom.yu.edu (Recipients of ABRF List)
Could someone PLEASE give me a simple way to do a search for a protein
sequence using ~5 residues