Hi,
Does anyone know of an algorithm that can do both sequence homology
and antigenicity predictions?
This would come in handy when a user wants an antibody that
distinguishes best among several fairly homologous forms of a protein.
So far, the way I go about this is to run the relevant sequences
through both types of algorithms and then compare (by hand, so to
say). When the number of homologous sequences is large this becomes a
bit complex. What I am looking for is an integrated program that does
both things simultaneously. Any suggestions? Thanks in advance.
Regards,
David Andreu
-- David Andreu, Prof. Scientific Director; Peptide Facility University of Barcelona, Spain Phone/Fax: 34-934 021 260 andreu@admin.qo.ub.es
--------------529EDC755707610C21686DF2 Content-Type: text/html; charset=us-ascii Content-Transfer-Encoding: 7bit
Hi,
Does anyone know of an algorithm that can do both sequence homology and antigenicity predictions?
This would come in handy when a user wants an antibody that distinguishes best among several fairly homologous forms of a protein. So far, the way I go about this is to run the relevant sequences through both types of algorithms and then compare (by hand, so to say). When the number of homologous sequences is large this becomes a bit complex. What I am looking for is an integrated program that does both things simultaneously. Any suggestions? Thanks in advance. Regards,
David Andreu
--
David Andreu, Prof.
Scientific Director; Peptide Facility
University of Barcelona, Spain
Phone/Fax: 34-934 021 260
andreu@admin.qo.ub.es
--------------529EDC755707610C21686DF2--