| Proteomics Standards Research Group (sPRG) |
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Current Members |
Studies |
Electronic Posters |
Publications |
Membership History |
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The mission of the ABRF Proteomics Standards Research Group (sPRG) is to promote and support the development and use of standards in proteomics for the benefit of all research laboratories, resource facilities and individual scientists including ABRF members and member laboratories. The sPRG is committed to identifying and implementing technical standards that reflect the ABRF’s commitment to accuracy, clarity, and consistency in the field of proteomics. Examples of technical standards include, but are not limited to, reference materials, data sets, conditions and procedures that give proteomics researchers and analysts independent criteria to evaluate their abilities to produce predictable, consistent results. The sPRG strongly supports ongoing efforts for standardization of the recording and reporting of proteomics experiments. |
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| Current Membership |
Dr. Alexander R. Ivanov
(Chair) - Northeastern University
Dr. Christopher Colangelo
- Yale University
Dr. Craig P. Dufresne
- Thermo Fisher Scientific
Dr Kathryn S Lilley
- University of Cambridge
Karl Mechtler
- IMP
Dr. Brett S Phinney
- Proteomics Core UC Davis Genome Center
Dr. Kristie L. Rose
- Vanderbilt University Medical Center
Brian C. Searle
- Proteome Software Inc.
Dr. Scott A. Shaffer
- University of Massachusetts Medical School
Dr. Susan T. Weintraub
- Univ. of Texas Health Science Center at San Antonio
Dr. Paul A Rudnick
(Ad hoc) - NIST
Dr. David B. Friedman
(EB Liaison) - Vanderbilt University
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| Studies |
| 1) |
The Proteomics Standards Group (sPRG) is pleased to announce our Comprehensive Standard for Analysis of Post-translational Modifications. This is the second part of our multi-year proteomics standard sPRG project and builds on our previous years phosphorylation standard study. The current sPRG study, already in progress, focuses on development of a standard that can be used in both assessment of a laboratory's ability to detect an array of post-translational modifications (PTMs) in a complex proteomic sample and development of new approaches for characterization of post-translationally modified proteins. At this point, all samples have been distributed.
The FASTA database file is available for download below; if you have trouble uncompressing and using this file, please email us at sPRG2011Standard@gmail.com and we will send it to you uncompressed (all correspondences are kept anonymous). The Results Reporting Template has been emailed directly to the study participants.
- FASTA database file- zipped
- Sample Information Letter
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| 2) |
sPRG 2010 Study Sample Request
- sPRG 2010 Study Sample Request
(36K)
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| 3) |
ABRF sPRG Study 2009 Announcement
- View ABRF sPRG Study 2009 Announcement
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| 4) |
The ABRF sPRG2009 Study Samples are expected to be distributed to
interested participants the week of March 9, 2009.
Please submit your request for samples by e-mail to Dr. Jim Farmar at jfarmar@aecom.yu.edu (note the spelling) and include the following:
Subject line: “Sample request”
Message:
Contact name
Affiliation
Complete mailing address (where you have packages delivered)
Phone
- View Document
(43K)
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| 5) |
ABRF sPRG Study 2007 Instructions for data entry (PDF)
- View ABRF sPRG Study 2007 Instructions
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| 6) |
ABRF sPRG Study 2007 Survey Open (PDF)
- View ABRF sPRG Study 2007 Survey Open
(14K)
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| 7) |
ABRF sPRG Study 2007 Announcement (PDF)
- View ABRF sPRG Study 2007 Announcement
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| 8) |
ABRF sPRG Study 2006 Data Request (PDF)
- View ABRF sPRG Study 2006 Data Request
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| 9) |
ABRF sPRG Study 2006 Sample Letter (PDF)
- View ABRF sPRG Study 2006 Sample Letter
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| 10) |
ABRF sPRG Study 2006 Announcement (PDF)
- View ABRF sPRG Study 2006 Announcement
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| Electronic Posters |
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| Publications |
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| Membership History |
| Member Name |
Organization |
Details |
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Dr. Philip Andrews |
Univ of Michigan Med School |
Member:
02/05 -
02/08
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Dr. David Arnott |
Genentech, Inc. |
Member:
02/05 -
08/09
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Dr. Jim G. Farmar |
Univ. of Virginia |
Member:
04/07 -
08/11
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Mary Ann Gawinowicz |
HHMI Columbia Univ |
Chair:
03/06 -
04/07
Member:
11/04 -
04/07
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Christopher R. Kinsinger |
National Cancer Institute |
Member:
08/09 -
09/11
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Dr Jeffrey A Kowalak |
NIMH |
Chair:
11/04 -
03/06
MemberEB Liaison:
11/04 -
03/10
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William S. Lane |
Harvard University |
Member:
02/05 -
08/09
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Dr Kathryn S Lilley |
University of Cambridge |
Member:
11/04 -
04/07
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Rachel Loo |
UCLA |
Chair:
02/08 -
05/08
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Larry Martin |
Northwestern University |
Member:
02/05 -
04/07
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Dr Manfred R Raida |
Experimental Therapeutic Center |
Member:
04/07 -
04/10
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Dr Steve E. Stein |
NIST |
Member:
11/04 -
04/07
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